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. 2006 Feb;188(4):1473–1488. doi: 10.1128/JB.188.4.1473-1488.2006

TABLE 1.

General features of the T. denitrificans strain ATCC 25259 genome

Characteristic Value
Chromosome size (bp) 2,909,809
G+C ratio (%) 66.07
Coding density (%) 92.5
No. of predicted protein coding genes 2,827
Average CDS length (bp) 952
No. of predicted proteins unique to T. denitrificans (%) 89 (3.1)
No. of rRNA operons 2
No. of tRNA genes 43
No. of other small RNAs 3
No. of predicted proteins with putative function (%) 2,183 (77.2)
No. of predicted proteins with unknown function (%) 644 (22.8)
Protein categories (%)
    Energy production 6.6
    Inorganic ion transport 5.7
    Cell envelope biogenesis 6.0
BLASTP comparison against the KEGG completed microbial genomes database (no. of top KEGG hits)
    β-Proteobacteria 1,624
    γ-Proteobacteria 455
    α-Proteobacteria 119
    δ-Proteobacteria 92
    Archaea 22