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. 2006 Mar 1;90(5):1463–1479. doi: 10.1529/biophysj.105.064733

TABLE 7.

Average major groove and minor groove widths for all PX molecules

Molecules Major groove width (Å) Minor groove width (Å)
PX55 Helix1 12.5 ± 2.1 5.48 ± 2.0
Helix2 13.32 ± 1.8 5.44 ± 1.8
PX65 Helix2 13.93 ± 2.1 6.43 ± 2.0
Helix2 13.93 ± 2.0 6.27 ± 2.4
PX75 Helix1 13.48 ± 2.8 6.35 ± 2.1
Helix2 13.68 ± 2.2 5.63 ± 1.6
PX85 Helix1 16.52 ± 3.9 5.49 ± 3.0
Helix2 15.1 ± 3.4 5.55 ± 2.5
PX95 Helix1 16.83 ± 3.7 5.78 ± 3.2
Helix2 14.7 ± 3.6 6.88 ± 3.2

The data have been averaged over the last 200 ps of the 2.5-ns MD runs.