TABLE 1.
Nuclease family
| Category | Proteina | Organismb | Abbreviation | Entrez accession no. |
|---|---|---|---|---|
| DNA polymerase associated proteins | DNA polymerase I | B. burgdorferi | Bbu POLI | 2688462 |
| DNA polymerase I | B. caldotenax | Bca POLI | 416913 | |
| DNA polymerase I | Bacillus stearothermophilus | Bst POLI | 3041672 | |
| DNA polymerase I | Escherichia coli | Eco POLI | 118825 | |
| DNA polymerase I | Helicobacter pylori | Hpy POLI | 2494177 | |
| DNA polymerase I | Streptococcus pneumoniae | Spn POLI | 118827 | |
| DNA polymerase | Thermus aquaticus | Taq POLI | 1942938 | |
| Exonuclease | E. coli | Eco EXO | 2507020 | |
| Exonuclease | Mycoplasma pneumoniae | Mpn EX53 | 2494184 | |
| Exonuclease | Bacillus subtilis | Bsu YPCP | 1730895 | |
| YY30 | Mycobacterium tuberculosis | Mtu YY30 | 1731347 | |
| Exodeoxyribonuclease | Bacteriophage T5 | T5 EXO5 | 119684 | |
| RNase H | Coliphage T4 | T4 RNH | 133162 | |
| Exodeoxyribonuclease | Bacteriophage T3 | T3 EXRN | 119705 | |
| IXPG proteins | XPG | C. elegans | Cel XPG | 2773206 |
| XPG | Xenopus laevis | Xle XPG | 267421 | |
| XPG | Homo sapiens | Hsa XPG | 267420 | |
| XPG | Mus musculus | Mmu XPG | 549454 | |
| Flap endonucleases | Flap endonuclease 1 | X. laevis | Xle FEN1 | 2674207 |
| Flap endonuclease 1 | M. musculus | Mmu FEN1 | 729476 | |
| Flap endonuclease 1 | H. sapiens | Hsa FEN1 | 729475 | |
| RAD2 DNA repair proteins | YEN1 | Saccharomyces cerevisiae | Sce YEN1 | 731457 |
| RAD2 | C. elegans | Cel RAD2 | 529362 | |
| Exonuclease I | Schizosaccharomyces pombe | Spo EXOI | 1706728 | |
| DIN7 | S. cerevisiae | Sce DIN7 | 2501673 | |
| Exonuclease I | S. cerevisiae | Sce EXOI | 1706421 | |
| TOSCA | Drosophila melanogaster | Dme TOSCA | 1419489 | |
| RAD2 | S. cerevisiae | Sce RAD2 | 131811 | |
| RAD13 | S. pombe | Spo RAD13 | 131777 | |
| RA27 | S. cerevisiae | Sce RA27 | 140964 | |
| RAD2 | S. pombe | Spo RAD2 | 730469 | |
| YA31 | S. pombe | Spo YA31 | 1175380 | |
| RAD2 | A. julgidus | Afu RAD2 | 2650376 | |
| RAD2 | Methanobacterium thermoautotrophicum | Mth RAD2 | 2622760 | |
| RAD2 | M. jannaschii | Mja RAD2 | 2127857 |
a
Nucleases with which Vhs shares homology.
b
Organisms from which the Vhs homologues are obtained.