TABLE 2.
Comparison of the LV prototype strain 87-012 with selected picornavirusesa
| Region |
Aphthovirus
|
Cardiovirus
|
Enterovirus
|
Erbovirus
|
Hepatovirus
|
Kobuvirus
|
Parechovirus
|
Rhinovirus
|
Teschovirus
|
|||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| FMDV | ERAV | EMCV | TMEV | PV1S | ERBV | HAV | AEV | AiV | HPEV1 | HRV2 | PTV1 | |
| 5′ UTRb | 46 | 35 | 48 | 46 | 36 | 48 | 39 | 42 | 39 | 50 | 38 | ND |
| VP0 | 23 | 24 | 29 | 23 | 17 | 26 | 24 | 25 | 20 | 50 | 25 | 25 |
| VP3 | 22 | 25 | 25 | 27 | 19 | 22 | 26 | 25 | 27 | 56 | 21 | 25 |
| VP1 | 17 | 22 | 17 | 24 | 19 | 22 | 31 | 32 | 40 | 45 | 25 | 23 |
| 2A1 | 44 | 50 | 40 | 41 | ND | 50 | ND | ND | ND | ND | ND | 59 |
| 2A2 | ND | ND | ND | ND | ND | ND | 28 | 25 | 25 | 55 | ND | ND |
| 2B | 35 | 18 | 22 | 26 | 27 | 24 | 22 | 13 | 22 | 52 | 20 | 25 |
| 2C | 25 | 31 | 26 | 26 | 27 | 15 | 27 | 29 | 31 | 50 | 27 | 26 |
| 3A | 28 | 27 | 19 | 24 | 16 | 9 | 24 | 18 | 25 | 30 | 22 | 19 |
| 3B | 50c | 42 | 40 | 17 | 23 | 25 | 18 | 12 | 27 | 52 | 20 | 29 |
| 3C | 23 | 25 | 25 | 26 | 27 | 23 | 21 | 21 | 23 | 48 | 20 | 19 |
| 3D | 26 | 26 | 29 | 31 | 31 | 28 | 28 | 28 | 27 | 50 | 29 | 28 |
| 3′ UTR | 28 | 46 | 29 | 35 | 47 | 41 | 52 | 44 | 36 | 47 | 50 | 42 |
Values are percent amino acid identities and percent nucleotide identities (for the 5′ and 3′ UTRs) between 87-012 and the selected picornaviruses. Values were calculated by using the GCG GAP program. ND, not determined.
It should be noted that the true length of the extreme 5′ end has been estimated by Southern blots only.
FMDV protein 3B1 (VPg1) is used for comparison.