BCR	B-cell receptor
BRCA	Breast invasive carcinoma
CAM	Cell adhesion molecule
C-indices	Concordance indices
CTC	Circulating tumor cell
CTC+	Circulating tumor cell-positive
CTC−	Circulating tumor cell-negative
DEG	Differentially expressed gene
ECM	Extracellular matrix
EMT	Epithelial–mesenchymal transition
GDSC	Genomics of Drug Sensitivity in Cancer
HR	Hazard ratio
KEGG	Kyoto Encyclopedia of Genes and Genomes
PPI	Protein–protein interaction
RNA-seq	RNA sequencing
RTK	Receptor tyrosine kinase
SRA	Sequence Read Archive
t-SEN	t-distributed stochastic neighbor embedding
TCR	T-cell receptor
VST	Variance stabilizing transformation