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. 2003 May;9(5):533–542. doi: 10.1261/rna.2199103

TABLE 2.

Structural statistics for the U6 ISL and SP-ISL

U6 ISL SP-ISL
With dipolar coupling data Without dipolar coupling dataa With dipolar coupling data Without dipolar coupling dataa
Structures
    Accepted 20 40 17 17
    Calculated 100 200 100 100
NOE-derived distance restraints (per nucleotide) 506 (21.1) 521 (21.7) 322 (13.4) 322 (13.4)
Dihedral restraints 145 145 144 144
Hydrogen-bond restraints 25 25 25 25
Dipolar coupling restraints 31 40
RMSD, all heavy atoms to the mean structure (Å)
    Overall (62–71, 73, 75–85) 0.79 ± 0.30b 1.46 ± 0.4 1.05 ± 0.3b 2.14 ± 0.8
    Internal loop (66–68, 78–81) 0.46 ± 0.2c 0.44 ± 0.3 0.49 ± 0.2c 0.58 ± 0.4
NOE violations (>0.5 Å) 0 0 0 0
Ave. dihedral violations (>5.0°) 0 0 0 0
Ave. NOE RMSD (Å) 0.027 0.018 0.029 0.041
Ave. dihedral RMSD (°) 0.640 1.270 0.710 0.761
Ave. RDC RMSD (Hz) 2.38 ± 0.11 2.35 ± 0.16

aPreviously determined (Huppler et al. 2002).

bThe RMSD for all heavy atoms excluding bulged nucleotides (62–71, 73, 75–85) is 1.16 ± 0.4 Å between U6 ISL and SP-ISL RNAs.

cThe internal loop (66–68, 78–81) RMSD for all heavy atoms is 0.55 ± 0.3 Å between U6 ISL and SP-ISL RNAs.