TABLE 1.
Occurrence and features of rnpB in complete fungal mtDNA sequences
| Organismal group | mtDNA-encoded rnpBa | P2 | P3 | P15 | P18 | P5,7,8,9,10,12 | Accession # |
| Ascomycota (Euascomycota) | |||||||
| Aspergillus nidulans | ▪ | ▪ | □ | □ | □ | ▪ | b |
| Hypocrea jecorina | □ | NC_003388 | |||||
| Neurospora crassa | □ | c | |||||
| Podospora anserina | □ | NC_001320 | |||||
| Verticillium lecanii | □ | AF487277 | |||||
| Ascomycota (Hemiascomycota) | |||||||
| Candida albicans | □ | NC_002653 | |||||
| Candida glabrata | ▪ | □ | □ | □ | ▪ | □ | AJ511533 |
| Pichia canadensis | ▪ | □ | □ | □ | ▪ | □ | NC_001762 |
| Saccharomyces castellii | ▪ | □ | □ | □ | ▪ | □ | AF437291 |
| Saccharomyces cerevisiae | ▪ | □ | □ | □ | ▪ | □ | NC_001224 |
| Yarrowia lipolytica | □ | NC_002659 | |||||
| Ascomycota (others) | |||||||
| Schizosaccharomyces japonicus | □ | NC_004332 | |||||
| Schizosaccharomyces octosporus | ▪ | ▪ | ▪ | ▪ | ▪ | □ | AF275271 |
| Schizosaccharomyces pombe | ▪ | ▪ | ▪ | ▪ | ▪ | □ | NC_001326 |
| Taphrina deformans | ▪ | ▪ | □ | □ | ▪ | ▪ | AY262107d |
| Basidiomycotae | □ | ||||||
| Chytridiomycotae | □ | ||||||
Filled and empty squares stand for presence or absence of the gene or helices, respectively.
aAll mtP-RNAs contain P1 and P4.
bThe A. nidulans sequence is almost complete: ODAS1, CAA33481, AAA99207, AAA31737, CAA25707, AAA31736, CAA23994, X15442, P15956, CAA23995, CAA33116, X00790, X15441, X06960, J01387, and X01507.
cCompleted at Whitehead Institute, currently available at http://pages.slu.edu/faculty/kennellj/genbank.html.
dThe GenBank record documents the rnpB sequence, the complete sequence is unpublished.
eMitochondrial rnpB genes have not been identified in basidiomycete (Cantharellus cibarius, unpubl.; Cryptococcus neoformans, NC00_4336; Microbotryum violaceum, unpubl.; Schizophyllum commune, NC_003049) or chytridiomycete fungi (Allomyces macrogynus, NC_001715; Harpochytrium94, AY182005; Harpochytrium105, AY182006; Hyaloraphidium curvatum, NC_003048).