TABLE 1.
Strain | Relevant genotype | Growth conditions | ho5U/Ψa | mo5U/Ψ | cmo5U/Ψ |
LT2 | Wild type | 100 klett | 0 | N/Db | 0.082 |
LT2 | Wild type | 24 h | 0 | N/D | 0.079 |
GT6854 | cmoA1<>frt | 100 klett | 0.041 | 0.036 | N/D |
24 h | 0.0017 | 0.087 | N/D | ||
GT6945 | cmoA4<>frt (ΔSAM) | 100 klett | 0.084 | N/D | N/D |
GT6856 | cmoB2<>frt | 100 klett | 0.072 | N/D | N/D |
GT6858 | cmoAB3<>frt | 100 klett | 0.072 | N/D | N/D |
GT6909 | aroD553::Tn10 | 100 klett | 0.014 | 0.0081 | N/D |
24 h | 0.011 | 0.023 | N/D |
The area of each compound monitored at 290 nm was divided with that of pseudouridine (Ψ) at 254 nm. Cells were either harvested at 100 klett units (about 4 × 108 cells/mL) or after incubation of the culture for 24 h.
aAn unknown compound, comigrating with ho5U, was present in all samples, so all values for ho5U are corrected by subtracting the value found in tRNA from strain LT2 at the same conditions.
b(N/D) Not detected.