TABLE 1.
Bacterial strains, plasmids and oligodeoxynucleotide primers
Description | Reference | |
Strains | ||
Acinetobacter calcoaceticus ADP1 | Wild type | Juni 1972 |
A. calcoaceticus ASD89 | Derived from ADP1: rlmAI, KanR | This study |
Escherichia coli | F−mcrA Δ(mrr-hsdRMS-mcrBC) φ80d lacZΔM15 ΔlacX74 | Life |
DH10B | deoR recA1 endA1 araD139 Δ (ara, leu)7697 galU galK λrpsL nupG | Technologies, Inc. |
E. coli IB10 | thr leu his argA relA rrmA10 | Björk and Isaksson 1970 |
E. coli TA531 | Δ (rrnE rrnB rrnH rrnA) rrnG::LacZ+rrnD::cat+rrnC::cat+ ΔrecA/pTRNA66, pHK-rrnC+ | Asai et al. 1999 |
Plasmids | ||
pHK-rrnC+ | Contains the entire, wild-type E. coli rrnC; used to maintain E. coli strain TA531: KanR | Asai et al. 1999 |
pNK | Contains the entire, wild-type E. coli rrnB: AmpR | Xiong et al. 2000 |
pSD50 | Acinetobacter rlmA fragment cloned in pUC19 at HincII: AmpR | This study |
pSD82 | Acinetobacter HindIII genome fragment with complete rlmAI sequence; cloned in pUC19: AmpR | This study |
pSD88 | Acinetobacter rlmAI gene cloned in pUHE24-2 at NedI/BglII: AmpR | This study |
pSD88-KanR | Disruption of pSD88 rlmAI gene at Eco47III: AmpR, KanR | This study |
pSD114 | Streptomyces fradiae rlmAII (tlrB) gene cloned in pWH845: AmpR, laclq | This study |
pSD118 | Corynebacterium glutamicum pAG1 rlmAII gene cloned in pWH845: AmpR, laclq | This study |
pSD189 | Acinetobacter rlmAI gene cloned in pWH845: AmpR, laclq | This study |
pUC19 | Cloning/sequencing vector: AmpR | Yanisch-Perron et al. 1985 |
pUHE24-2 | Cloning/expression vector: AmpR | Bujard et al. 1987 |
pWH845 | Acinetobacter/E.coli shuttle vector: AmpR, laclq | Schirmer et al. 1997 |
AmpR and KanR indicate ampicillin and kanamycin resistance.