Skip to main content
. 2006 Feb;12(2):235–247. doi: 10.1261/rna.2237806

TABLE 1.

Structural statistics for D5-PL

With RDC Without RDC
A. Restraints for structure calculations
No. of structures
    Accepted 10 30
    Calculated 30 100
No. of intraresidue distance restraints 349 349
No. of interresidue distance restraints 200 200
No. of dihedral restraints 304 304
No. of hydrogen-bond restraints 60 60
No. of dipolar coupling restraints 37 0
B. Average RMS deviation of experimental data
Average RMS deviation of distance (Å) 0.019 0.018
Average RMS deviation for dihedral angle (L) 0.676 0.528
Average RMS deviation for RDC (Hz) 2.5 0
C. Average RMS deviation from idealized geometry
    Bonds (Å) 0.017 0.018
    Angles (L) 0.628 0.659
    Improper(L) 0.344 0.330
D. Violations
    NOE violations >0.2 A ° 0 0
    Dihedral violations >5L 0 0
E. Heavy atoms average RMS deviation from the mean structure and (RMS pairwise difference between structures) (Å)
Overall 0.65 ± 0.13 (0.97 ± 0.20) 1.34 ± 0.38 (1.99 ± 0.52)
Lower helix (residues 1–8, 27–34) 0.43 ± 0.07 (0.64 ± 0.14) 0.72 ± 0.13 (1.07 ± 0.27)
Upper helix (residues 10–14, 19–23) 0.33 ± 0.07 (0.49 ± 0.11) 0.63 ± 0.16 (0.93 ± 0.22)
Tetraloop (residues 15–18) 0.34 ± 0.07 (0.51 ± 0.18) 0.47 ± 0.08 (0.70 ± 0.16)
Bulge (residues 9, 24, 25, 26) 1.35 ± 0.16 (2.00 ± 0.34) 1.42 ± 0.42 (2.12 ± 0.66)
Bulge (residues 9, 24, 26) 0.86 ± 0.07 (1.28 ± 0.34) 1.42 ± 0.42 (2.12 ± 0.66)