Table 3.
Oligonucleotide primers and probes used for detection of Bluetongue virus.
| No. | Primer/Probe | Sequence (5′–3′) | GC content (%) | Product size (bp) |
|---|---|---|---|---|
| 1 | BTV10/1-F | YGCRATTCACGGYGTAAA | 47.2 | 112 |
| BTV10/1-R | CCGTGCAAAGTGGRCTACACR | 52.4 | ||
| BTV10/1-Probe | ATGCCAGGSCCGCTCACACG | 65.0 | ||
| 2 | BTV10S/2-F | SCCGCTCACACGTGCKATY | 57.9 | 119 |
| BTV10S/2-R | ACCGACACACCRCHYRTGTAAC | 56.0 | ||
| BTV10S/2-Probe | DCGCCGCYTAYGYRTAGYCCACT | 60.1 | ||
| 3 | BTV-VP7-F | ACRCGWGCDATYGCDCGCG | 66.7 | 121 |
| BTV-VP7-R | GTAAGTGTAATYTHAGAGACGT | 35.6 | ||
| BTV-VP7-Probe | CRCTTTGCACGGGTGTGGGTT | 59.5 | ||
| 4 | BTV-VP7/1-F | GTTAAAAATCTHDAGAGAT | 24.6 | 109 |
| BTV-VP7/1-R | GCRCATGCYCGCATYACRG | 63.2 | ||
| BTV-VP7/1-Probe | ACACTATCGCNGCAAGRGCRC | 59.5 |