Table 5.
Synonymous and nonsynonymous substitutions within vacA s region, babB, and HP0638
Genetic locus | Ks | Ka | Ka/Ks |
---|---|---|---|
vacA s-region | |||
Total (n = 69) | 0.36 ± 0.18 | 0.13 ± 0.09 | 0.38 ± 0.32 |
PA s1c (n = 10) | 0.05 ± 0.10 | 0.00 ± 0.01 | 0.06 ± 0.06 |
East Asian s1c (n = 18) | 0.13 ± 0.08 | 0.01 ± 0.02 | 0.07 ± 0.11 |
PA vs East Asian s1c | 0.25 ± 0.09 | 0.00 ± 0.01 | 0.02 ± 0.05 |
babB | |||
Total (n = 28) | 0.37 ± 0.14 | 0.07 ± 0.03 | 0.19 ± 0.08 |
PA (n = 5) | 0.24 ± 0.25 | 0.06 ± 0.05 | 0.23 ± 0.16 |
East Asian (n = 7) | 0.23 ± 0.05 | 0.03 ± 0.01 | 0.13 ± 0.04 |
PA vs. East Asian | 0.36 ± 0.12 | 0.08 ± 0.02 | 0.22 ± 0.05 |
HP0638 | |||
Total (n = 59) | 0.17 ± 0.09 | 0.05 ± 0.02 | 0.26 ± 0.22 |
PA (n = 13) | 0.12 ± 0.11 | 0.03 ± 0.02 | 0.24 ± 0.21 |
East Asian (n = 18) | 0.15 ± 0.04 | 0.06 ± 0.05 | 0.25 ± 0.20 |
PA vs. East Asian | 0.16 ± 0.07 | 0.05 ± 0.02 | 0.41 ± 0.26 |