Table 2.
Refinement statistics of BPPS structures
| Structure | BPPS | BPPS–PPi | BPPS–1 | BPPS–1 | BPPS–2 | BPPS–3 | BPPS–BPP |
|---|---|---|---|---|---|---|---|
| Limiting resolution, Å | 2.0 | 2.3 | 2.3 | 3.1 | 2.4 | 2.4 | 2.3 |
| No. of reflections, work/test | 89,853/3,756 | 61,228/3,269 | 57,096/2,410 | 24,228/2,072 | 53,718/2,862 | 53,674/2,864 | 58,692/2,465 |
| R/Rfree | 0.203/0.234 | 0.213/0.242 | 0.206/0.229 | 0.206/0.233 | 0.220/0.255 | 0.208/0.246 | 0.210/0.238 |
| Protein atoms | 8,549 | 8,699 | 8,717 | 4,405 | 8,719 | 8,742 | 8,751 |
| Water molecules | 588 | 290 | 269 | 26 | 226 | 222 | 348 |
| Metal ions/ligand atoms | 15/0 | 6/18 | 6/38 | 3/19 | 7/38 | 6/38 | 6/38 |
| rms deviations | |||||||
| Bond lengths, Å | 0.006 | 0.006 | 0.006 | 0.006 | 0.007 | 0.007 | 0.007 |
| Bond angles, ° | 1.1 | 1.1 | 1.1 | 1.2 | 1.1 | 1.1 | 1.2 |
| Proper dihedral angles, ° | 18.5 | 18.7 | 18.9 | 19.2 | 18.7 | 18.8 | 18.8 |
| Improper dihedral angles, ° | 0.8 | 0.8 | 0.8 | 0.8 | 0.8 | 0.8 | 0.9 |
| PDB ID code |
Complexes: analogues 1–3 indicated in Fig. 1. All complexes are isomorphous with native BPPS in space group P212121.
The structure of the BPPS–1 complex was also solved in space group P6322.
R = ∑||Fo|−|Fc∥/∑|Fo|, where |Fo| and |Fc| are the observed and calculated structure factor amplitudes, respectively. Rfree is calculated in the same manner for reflections in the test set excluded from refinement.