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. 2002 Dec 1;30(23):5120–5128. doi: 10.1093/nar/gkf625

Table 1. G4122E mutant DNA-PKcs supports reduced levels of VDJ recombination.

Expression vectors Experiment Signal (pJH201) AmpR + CamR / AmpR Ratea (%) Fidelityb (%) Coding (pJH290) AmpR + CamR / AmpR Ratea (%)
No RAGS 1 0/5560 0.00   0/22 380 0.00
  2 0/660 0.00   0/0 0.00
  3 0/91 080 0.00   1/114 960 0.00
  4 0/85 840 0.00   1/40 368 0.00
RAGS 1 11/6380 0.17   0/44 000 0.00
  2 0/840 0.00   0/0 0.00
  3 31/63 120 0.05   0/53 760 0.00
  4 40/22 736 0.18   0/79 576 0.00
      0.09 ± 0.04c      
Wild-type DNA-PKcs 1 127/3300 3.85 70 (7/10) 114/21 000 0.54
  2 7/720 0.90 ND 10/3120 0.32
  3 496/32 520 1.52 80 (8/10) 402/60 360 0.67
  4 230/9976 2.31 100 (7/7) 345/49 300 0.70
      2.2 ± 0.64c 86.7 ± 7.6d   0.56 ± 0.09c
G4122E DNA-PKcs 1 34/3760 0.90 90 (9/10) 8/16 080 0.05
  2 2/1560 0.13 ND 4/2640 0.16
  3 140/31 080 0.45 89 (8/9) 50/100 800 0.05
  4 188/35 380 0.53 90 (9/10) 54/57 072 0.09
      0.50 ± 0.16c 89.0 ± 0.3d   0.09 ± 0.03c

aRate is the percentage of replicated substrates that underwent V(D)J recombination and is derived from the formula [AmpR + CamR / AmpR] × 100.

bFidelity is expressed as the percentage of recovered signal joints that were susceptible to ApaLI digestion.

cAverage recombination rate ± SEM.

dAverage fidelity ± SEM.