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. 2002 Dec 1;30(23):5160–5167. doi: 10.1093/nar/gkf651

Table 1. Oligomer sequence, Tm values and inhibition of luciferase activity data for LNAs and LNA–DNA chimeras that target the 5′-UTR of luciferase mRNA.

ID Sequence 5′→3′ Tm (°C) DNA:DNA Tm (°C) LNA:DNA Inhibition (%)
        25 nM 100 nM 200 nM
I AgggTcGcTCGGT 66 ND 50 63 76
II AgggTcGcTCAAT 51 65 0 0 21
III ACACCGAGcGacccT 71 ND 0 0 0
IV AgggTcGcTCGGTgT 71 ND 69 80 95
V AgggTcGcTCAATgT 66 83 20 19 21
VI AGGGTCGCTCGGTGT 66 ND 76 83 93
VII TAaGcggGTcGcTGC 66 86 28 36 48
VIII AGGGtcgctcgGTGT 71 78 33 74 81
IX TCGAgatctgcGGCA 64 68 11 22 25
X TTACcaacagtACCG 54 71 0 0 5

Capitalized letters within a sequence represent LNA bases, lower case letters represent DNA bases and underlined bases depict mismatches relative to the mRNA target. ND, Tm not determined because it was too high to accurately measure.