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. 2002 Dec 1;30(23):e131. doi: 10.1093/nar/gnf131

Figure 3.

Figure 3

The correlation curve of the failure rate of the SNP-IT reaction with the combined score (left) and distribution of failed and passed SNP markers against the combined score (right). The score values in the correlation curves (x-axis) and number of markers in the distribution curves (y-axis) are normalized for comparison. Combined scores were calculated using logistic regression analysis of primary scores for three training sets of SNP markers. The normalization of scores is done by dividing all score values by the minimal (maximal) score. The distribution curves are normalized by plotting fraction of passed or failed markers instead of total number of markers. Distributions of passed markers are shown in green, distributions of failed markers are shown in red. (A) Model for single-plex standard SNP-IT assay (23 525 markers). (B) Model for 12-plex SNP-IT assay used on the SNPcode Orchid instrument (30 948 markers). (C) Model for 24-plex SNP-IT assay used on the SNPcode Orchid instrument (30 576 markers).