Table 4.
distance (Å)
|
|||
---|---|---|---|
TEM-76 | TEM-32 | WT* a | |
catalytic waterb–Ser70 Oγ | 2.6 | 2.8 | 2.8 |
catalytic water–Glu166 Oε2 | 2.3 | 2.5 | 2.7 |
catalytic water–Asn170 Nδ | 3.2 | 2.7 | 2.6 |
oxyanion hole waterc–Ser70 Oγ | 2.8 | 3.0 | 2.7 |
oxyanion hole water–Ser70 N | 3.0 | 2.9 | 2.8 |
oxyanion hole water–Ala237 N | 2.9 | 3.2 | 3.1 |
oxyanion hole water–Ala237 O | 2.7 | 2.6 | 2.8 |
C3 waterd–Arg244 NH2 | 2.7 | 2.9 | 2.8 |
C3 water–Ser235 Oγ | 3.7 | 3.1 | 2.8 |
Ser70 Oγ–Lys73 Nζ | 3.4 | 3.1 | 2.8 |
Ser70 Oγ–Ser130 Oγ | NPe | 5.5 | 3.2 |
Ser130 Oγ–Lys73 Nζ | NP | 5.4 | 3.8 |
Ser130 Oγ–Lys234 Nζ | NP | 3.3 | 2.8 |
active site waterf–Ser70 Oγ | 2.9 | 2.7 (first)g
3.2 (second) |
NP |
active site water–Lys73 Nζ | 2.8 | 2.9 | NP |
active site water–Lys234 Nζ | 3.0 | 2.9 | NP |
active site water–Lys234 Nζ(B) | 2.9 | NP | NP |
active site water(B)–Ser70 Oγ | 3.1 | NP | NP |
active site water(B)–Lys73 Nζ | 3.8 | NP | NP |
active site water(B)–Lys234 Nζ | 3.7 | NP | NP |
active site water(B)–Lys234 Nζ(B) | 4.0 | NP | NP |
Lys73 Nζ–Asn132 Oδ1 | 3.0 | 3.0 | 3.0 |
PDB entry 1JWP.
The catalytic water is numbered Wat1561 in TEM-76, Wat6 in TEM-32, and Wat57 in WT*.
The oxyanion hole water is numbered Wat1012 in TEM-76, Wat5 in TEM-32, and Wat196 in WT*.
This water, expected to interact with the C3 carboxylate of β-lactams, is numbered Wat1614 in TEM-76, Wat7 in TEM-32, and Wat99A in WT*.
Not present.
The active site water is numbered Wat1023A/Wat1023B in TEM-76 and Wat85 in TEM-32.
Measured from the alternate conformations of Ser70 seen in TEM-32.