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. Author manuscript; available in PMC: 2006 Feb 27.
Published in final edited form as: J Biol Chem. 2005 Mar 23;280(22):21004–21014. doi: 10.1074/jbc.M413191200

Table III.

Primers for real-time PCR specific for human genes

Gene Amplicon location (GenBank accession number) Exon Sequences
Human COL1A1 mRNA 201–1735 (NC_000017)
 Forward primer Exon1 5′-CAGGTCTCGGTCATGGTACCT-3′
 Taqman probe Exon1/2 6FAM-CATCCCACCAATCACCTGCGTACAGA-TAMRA
 Reverse primer Exon2 5′-GTCGAGGGCCAAGACGAA-3′
Human COL1A2 mRNA 7568–8965 (AF004877)
 Forward primer Exon5 5′-GCCCCCCAGGCAGAGA-3′
 Taqman probe Exon5/6 6FAM-CCTGGTCTCGGTGGGAACTTTGCTG-TAMRA
 Reverse primer Exon6 5′-CCAACTCCTTTTCCATCATACTGA-3′
Human type III CIITA mRNA 156–218 (AF410154)
 Forward primer Exon1 5′-ACGCCCTGCTGGGTCC-3′
 Taqman probe Exon1/2 6FAM-ACCTGTCAGAGCCCCAAGGCAGC-TAMRA
 Reverse primer Exon2 5′-AACTCCATGGTGGCACACTG-3′
Human HLA-DRA mRNA 341–427 (NM01911)
 Forward primer Exon2 5′-GCCAACCTGGAAATCATGACA-3′
 Taqman probe Exon2/3 6FAM-CAACTATACTCCGATCACCAATGTACCTCCAGAG-TAMRA
 Reverse primer Exon3 5′-AGGGCTGTTCGTGAGCACA-3′