. 2006 Mar;18(3):676–687. doi: 10.1105/tpc.105.038240

Table 1.

Nucleotide and Amino Acid Variations among the Rf1b and rf1b Alleles in Restorer and Nonrestorer Lines

		Nucleotide Position^a
Rice Line	Genotype	12	17	24	26	97	102	153	231	393	421	450	466	704	847	979	1125	1203	1235	1379
C9083(j)^b	Rf1b	c/R^c	c/A	c/R	c/A	g/A	c/G	c/A	t/R	g/L	a/T	c/R	g/G	t/I	c/Q	g/D	c/V	g/Q	a/N	c/A
MH63(i)^b	Rf1b	c/R	c/A	c/R	c/A	g/A	c/G	c/A	c/R	g/L	a/T	c/R	g/G	c/T	c/Q	t/Y	t/V	c/Q	a/N	g/G
C418(j)	Rf1b	c/R	c/A	a/R	g/G	g/A	c/G	c/A	c/R	g/L	a/T	c/R	g/G	t/I	c/Q	g/D	c/V	g/Q	a/N	c/A
Xiangqing(j)	Rf1b	c/R	a/D	c/R	c/A	g/A	a/G	c/A	c/R	g/L	a/T	c/R	g/G	t/I	c/Q	g/D	c/V	g/Q	a/N	c/A
Teqing(i)	Rf1b	t/R	c/A	c/R	c/A	g/A	a/G	t/A	c/R	g/L	a/T	c/R	g/G	c/T	c/Q	g/D	c/V	g/Q	a/N	c/A
C98(j)	Rf1b	c/R	c/A	c/R	c/A	g/A	c/G	c/A	c/R	g/L	a/T	c/R	g/G	t/I	c/Q	g/D	c/V	g/Q	a/N	c/A
731A(j)	rf1b	c/R	c/A	c/R	c/A	g/A	a/G	c/A	c/R	g/L	a/T	t/R	a/S	t/I	c/Q	g/D	c/V	g/Q	g/S	c/A
KFA(j)	rf1b	c/R	c/A	c/R	c/A	g/A	a/G	t/A	c/R	t/L	g/A	t/R	a/S	c/T	c/Q	g/D	c/V	g/Q	g/S	c/A
ZD88A(j)	rf1b	c/R	c/A	c/R	c/A	g/A	a/G	t/A	c/R	g/L	a/T	t/R	a/S	t/I	c/Q	g/D	c/V	g/Q	g/S	c/A
WYJ8A(j)	rf1b	c/R	c/A	c/R	c/A	t/F	a/G	c/A	c/R	g/L	a/T	c/R	g/G	t/I	a/K	g/D	c/V	g/Q	g/S	c/A
Nipponbare(j)	rf1b	c/R	c/A	c/R	c/A	g/A	c/G	c/A	c/R	g/L	a/T	t/R	a/S	t/I	c/Q	g/D	c/V	g/Q	g/S	c/A
Fuyu1A(i)	rf1b	c/R	c/A	c/R	c/A	g/A	c/G	c/A	c/R	t/L	a/T	c/R	g/G	c/T	c/Q	t/Y	t/V	g/Q	g/S	c/A

Nucleotide positions in the coding regions are shown.

(j) and (i) indicate the nuclear backgrounds of japonica and indica, respectively. The restorer lines with japonica nuclear background (j) are restorer near-isogenic lines bred by recurrent backcrosses with indica restorer lines as the donor parents.

Nucleotide/amino acid.