TABLE 1.
Specificity | Primer name | Sequence | PCR product size (bp) |
---|---|---|---|
16S rRNA; all members | EC9 | 5′-TACCTTGTTACGACTT> | 1,462 |
EC12A | 5′-TGATCCTGGCTCAGAACGAACG | ||
16S rRNA E. muris | EM87f | 5′-GGTTCGCTATTAGTGGCAGA | 517 |
EM584r | 5′-CAGTATTAAAAGCCGCTCCA | ||
16S rRNA Ehrlichia HF strain | HF51f | 5′-AAGTCGAACGGACAATTACC | 923 |
HF954r | 5′-GTTAGGGGGATACGACCTTC | ||
16S rRNA N. mikurensis | IS58-62f | 5′-GGAATAGCTGTTAGAAATGACA | 488 |
IS58-594r | 5′-CTATCCTCTCTCGATCTCTAGTTT | ||
16S rRNA A. phagocytophilum | SSAP2f | 5′-GCTGAATGTGGGGATAATTTAT | 641 |
SSAP2r | 5′-ATGGCTGCTTCCTTTCGGTTA | ||
16S rRNA A. centrale | AC1f | 5′-CTGCTTTTAATACTGCAGGACTA | 426 |
AC1r | 5′-ATGCAGCACCTGTGTGAGGT | ||
16S rRNA A. bovis | AB1f | 5′-CTCGTAGCTTGCTATGAGAAC | 551 |
AB1r | 5′-TCTCCCGGACTCCAGTCTG | ||
p44 | p3709 | 5′-GCTAAGGAGTTAGCTTATGA | ∼400 |
p4257 | 5′-AGAAGATCATAACAAGCATTG | ||
p44 | p3761 | 5′-CTGCTCTKGCCAARACCTC | ∼300 |
p4183 | 5′-CAATAGTYTTAGCTAGTAACC |