TABLE 1.
Summary statistics of ESTs obtained from Fusarium oxysporum cDNA libraryb
| Parameter | Value | % of total TUTs |
|---|---|---|
| Total no. of EST clones | 6,448 | |
| Avg EST length (nt) | 362 | |
| G + C content (%) | 50.8 | |
| Total no. of TUTs | 3,372 | 100 |
| Singletons (one EST) | 2,755 | 81.7 |
| Contigs (two or more ESTs) | 617 | 18.3 |
| TUTs exhibiting homology to encoded protein sequences (UniProt proteins of known function and hypothetical proteins)a | 1,769 | 52.46 |
| TUTs exhibiting homology to encoded protein sequences (UniProt proteins of known function)a | 924 | 27.40 |
a
The criterion for BLASTx was an E value of ≤1E−3.
b
All information about the F. oxysporum cDNA library, ESTs, and TUTs can be downloaded from www.estarray.org.