TABLE 1.
BSH homologs in the genomes of sequenced probiotic strainsa
| Strainb | bsh homolog(s) (accession no.) | Size (aa) of predicted productc |
|---|---|---|
| Lactobacillus plantarum WCFS1* | lp_0067 (bsh 2) CAD62757 NP_783921 | 338 |
| lp_2572 (bsh 4) CAD64848 NP_785997 | 317 | |
| lp_3362 (bsh 3) CAD65471 NP_786598 | 328 | |
| lp_3536 (bsh 1) CAD65617 NP_786739QO6115 | 324 | |
| Lactobacillus johnsonii NCC533* | LJ1412 (NP_965212AAS09178) | 326 |
| LJ1147 (NP_965003AAS08969) | 325 | |
| LJ0056 (NP_964072AAS08038) | 316 | |
| Bifidobacterium longum NCC2705* | BLO796 (AAN24611NP_695975) | 317 |
| Lactobacillus acidophilus NCFM ATCC700396* | LBA1078 (bshB) (AAV42923YP_193954) | 325 |
| LBA0892 (AAV42751YP_193782) | 325 | |
| Lactobacillus brevis ATCC 367† | Scaffold 6, gene 1422 | 327 |
| Scaffold 29, gene 944 | 255 | |
| Lactobacillus gasseri ATCC 33323† | Scaffold 1, gene 149 | 325 |
| Scaffold 6, gene 1551 | 316 | |
| Bifidobacterium longum DJO10A† | Scaffold 1, revised gene 87 | 317 |
a
The information was collated in July 2005.
b
*, data were obtained from the National Center for Biotechnology Information genome site (http://www.ncbi.nlm.nih.gov/); †, data were obtained from the Joint Genome Institute microbial genomics site (http://genome.jgi-psf.org/).
c
aa, amino acids.