TABLE 2.
Similarity of CNGV to fish and amphibian herpesvirus genes (Blast X)a
| Gene (accession no.) | Virus | Accession no. | Identity (%) | Similarity (%) | Gaps (%) |
|---|---|---|---|---|---|
| DNA polymerase gene (AY939862) | Cyprinid herpesvirus 1 | AAX53084 | 976/1,309 (74) | 1,121/1,309 (85) | 11/1,309 (0) |
| Cyprinid herpesvirus 2 | AAX53083 | 140/155 (90) | 147/155 (94) | ||
| Anguillid herpesvirus 1 | AAK00356 | 99/155 (63) | 122/155 (77) | 1/155 (0) | |
| Ranid herpesvirus 1 | AAD12269 | 282/1,047 (26) | 449/1,047 (41) | 140/1,047 (13) | |
| Ictalurid herpesvirus 1 | NP_041148 | 217/801 (27) | 349/801 (43) | 107/801 (13) | |
| DNA helicase gene (AY939857) | Cyprinid herpesvirus 1 | AAX53077 | 344/482 (71) | 398/482 (82) | 2/482 (0) |
| Cyprinid herpesvirus 2 | AAX53078 | 219/302 (72) | 238/302 (78) | 26/302 (0) | |
| Ictalurid herpesvirus 1 | NP_041116 | 127/493 (25) | 214/493 (42) | 64/493 (12) | |
| Intercapsomeric triplex protein gene (AY939859) | Cyprinid herpesvirus 1 | AAX53080 | 205/370 (55) | 272/370 (73) | 5/370 (1) |
| Cyprinid herpesvirus 2 | AAX53081 | 58/88 (65) | 67/88 (75) | 3/88 (3) | |
| Ictalurid herpesvirus 1 | NP_041118 | 76/333 (22) | 118/333 (34) | 85/333 (25) | |
| Major capsid protein gene (AY787402) | Cyprinid herpesvirus 1 | AAX53086 | 823/1,279 (64) | 1,008/1,279 (78) | 21/1,279 (1) |
| Ictalurid herpesvirus 1 | NP_041130 | 252/1,170 (21) | 414/1,170 (34) | 211/1,170 (18) | |
| Unidentified open reading frame (AY208988) | Cyprinid herpesvirus 1 | AAX53075 | 96/135 (71) | 118/135 (87) | 1/135 (0) |
| Ranid herpesvirus 1 | AAD12270 | 72/260 (27) | 119/260 (45) | 16/260 (6) | |
| Ictalurid herpesvirus 1 | NP_041147 | 54/186 (29) | 87/186 (46) | 13/186 (6) |
a
Five viral proteins were analyzed by using the standard Blast X program. Identity is the number of amino acids with identity/total number of amino acids of the protein, similarity is the number of conserved amino acids/total number of amino acids; and gaps are number of gaps/total number of amino acids. Data are based on references 38 and 49.