TABLE 3.
Similarity of CNGV to representatives of poxviruses and other large DNA viruses (Blast X)a
| Gene (accession no.) | Family | Virus | Accession no. | Identity (%) | Similarity (%) | Gaps (%) |
|---|---|---|---|---|---|---|
| Serine protease inhibitor homologue gene (AY661550) | Poxviridae | Fowlpox virus (B22R homologue) | NP_039060 | 55/139 (39) | 81/139 (58)b | 3/139 (2) |
| Variola virus (B26R homologue) | CAA49135 | 45/112 (40) | 64/112 (57)b | 1/112 (0) | ||
| Thymidylate kinase gene (DQ118125) | Poxviridae | Canarypox virus | NP_955193 | 106/216 (49) | 143/216 (66) | 8/216 (3) |
| Nimaviridae | Shrimp white spot syndrome virus | AAK77840 | 82/191 (42) | 117/191 (61) | 1/191 (0) | |
| TK-dTMP | ||||||
| Iridoviridae | Chilo iridescent virus | AAK82112 | 72/176 (40) | 117/176 (66) | 3/176 (1) | |
| Asfarviridae | African swine fever virus | CAA79604 | 57/192 (29) | 89/192 (46) | 8/192 (4) | |
| Ribonucleotide reductase gene (AY786308) | Poxviridae | Monkeypox virus | AAU01269 | 447/803 (55) | 580/803 (72) | 35/803 (4) |
| Baculoviridae | Spodoptera litura nucleopolyhedrovirus | AAL01709 | 415/763 (54) | 555/763 (72) | 13/763 (1) | |
| Phycodnaviridae | Feldmannia irregularis virus a | AAR26844 | 394/765 (51) | 529/765 (69) | 12/765 (1) | |
| Mimivirus | Acanthamoeba polyphaga mimivirus | YP_142667 | 346/733 (47) | 489/733 (66) | 12/733 (1) | |
| Nimaviridae | Shrimp white spot syndrome virus | AAL89096 | 379/845 (44) | 538/845 (63) | 49/845 (5) | |
| Asfarviridae | African swine fever virus | P42491 | 285/737 (38) | 415/737 (56) | 64/737 (8) | |
| Herpesviridae | Ostreid herpesvirus 1 | YP_024594 | 263/741 (35) | 415/741 (56) | 58/741 (7) | |
| Thymidine kinase gene (AJ535112) | Poxviridae | Cowpox virus | AAF21104 | 71/171 (41) | 114/171 (66) | 3/171 (1) |
| Mimivirus | Acanthamoeba polyphaga mimivirus | YP_142612 | 60/181 (33) | 102/181 (56) | 14/181 (7) | |
| Nimaviridae | Shrimp white spot syndrome virus | AAG40728 | 69/178 (38) | 100/178 (56) | 8/178 (4) | |
| Asfarviridae | African swine fever virus | AAQ07945 | 52/177 (29) | 81/177 (45) | 10/177 (5) |
a
Four viral genes were analyzed by using the standard Blast X program. For definitions, see Table 2, footnote a.
b
The assessed fragments do not represent the sequences of complete proteins.