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. Author manuscript; available in PMC: 2006 Mar 8.
Published in final edited form as: Viral Immunol. 2005;18(1):17–26. doi: 10.1089/vim.2005.18.17

Table 2.

The Top Four Protein Folds Comparable to that of HAstV-1 Coat Protein Residues 1-415 by 3D-PSSM Threading

Templatea Template length (no. of residues) Sequence Identity (%) Confidenceb(%)
TMEV 267 13 >93
BPMV 185 18 >76
CMtV 267 20 >72
TBSV 286 13 >57
a

TMEV, Theiler’s murine encephalomyelitis virus DA strain; BPMV, bean pod mottle virus; CMtV, carnation mottle virus; TBSV, tomato bushy stunt virus.

b

Confidence is defined as 100 X probability of a match being correct (26)

HHS Vulnerability Disclosure