Table 4.
The Top Protein Folds Comparable to that of the Astrovirus Coat Protein Residues 416-End by 3D-PSSM Threading
| Astrovirus | Template | Template length (no. of residues) | Sequence identity (%) | Confidence |
|---|---|---|---|---|
| HAstV-2 | Poliovirus receptor | 301 | 15 | >62 |
| HAstV-3 | Sindbis virus spike glycoprotein E1 | 369 | 15 | >98 |
| HAstV-4 | Interleukin 6 receptor, Alpha chain | 299 | 18 | >65 |
| FAstV-1 | BAFF-BAFF-R complex | 288 | 10 | >91 |
| ANVa | Neutrophil gelatinase-associated lipocalin | 174 | 12 | >84 |
| ANV | Adenovirus fiber protein head domain (knob domain) | 191 | 19 | >51 |
a
Two templates that had a significant comparability (>50%) were found for ANV.