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. 2002 Nov;40(11):4114–4120. doi: 10.1128/JCM.40.11.4114-4120.2002

TABLE 6.

Sequence identity of a 348-nt region of ORF2 among serotype 4 (deduced from genotype) central Australian astrovirus strains and prototype serotype 4 astrovirus

Strain % Sequence identity in (yr of isolation)a:
Prototype 1982 (CAV4A) 1985 (CAV4B) 1994 (CAV4C) 1995
1997 (CAV4F) 1998 (CAV4G)
CAV4D CAV4E
Prototype 96.3 94.3 96.6 96.0 96.0 90.8 93.7
CAV4A 99.1 94.3 98.9 98.6 98.6 91.7 93.4
CAV4B 99.1 100 94.5 94.3 94.3 90.8 97.4
CAV4C 99.1 100 100 99.1 99.1 91.4 93.7
CAV4D 99.1 100 100 100 99.4 91.1 92.8
CAV4E 99.1 100 100 100 100 91.7 92.8
CAV4F 99.1 100 100 100 100 100 90.2
CAV4G 99.1 100 100 100 100 100 100
a

Numbers at the top right indicate results of a pairwise comparison of the 348-nt regions, and numbers at the bottom left indicate results of pairwise comparison of the deduced amino acid sequences of the regions.