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. 2001 Jan 15;20(1-2):231–239. doi: 10.1093/emboj/20.1.231

Table I. m1G37 levels in tRNA and growth deficiency of S.typhimurium trmD mutants.

trmD alleles trmD+ trmD23 trmD27/31 trmD30 trmD28 trmD25 trmD26 trmD3/24 trmD33 trmD29 trmD32
Amino acid substitution   P58L/L94F S88L G117S G117N G117Q S165L P184L G199R G214D W217D
m1G/Ψa 0.12 0.006 <0.005 0.005 <0.005 0.014 0.005 0.047 0.006 <0.005 0.040b
Relative colony size atc                      
 22°C 1 (1.4 mm)d No col.e 0.3 0.6 No col.e 1.1 e 1.1 <0.1 1.1 e
 30°C 1 (3 mm)d 0.4 0.7 0.7 0.2 0.8 <0.1 0.8 0.5 0.9 <0.1
 37°C 1 (1.8 mm)d 0.4 0.7 0.6 <0.1 0.7 0.1 0.9 0.4 0.1–0.7 <0.1
 42.5°C 1 (2.2 mm)d <0.1 <0.1 0.3 No col.e 0.4 0.4 0.5 0.3 <0.1 0.2–0.4
 44°C 1 (2.5 mm)d No col.e No col.e 0.2 No col.e 0.3 0.3 0.3 0.1 <0.1 0.3

aThe level of m1G was determined by HPLC in bulk tRNA prepared from cells grown in a rich medium (LB) at 37°C and is expressed as the absorbance of m1G relative to that of pseudouridine (Ψ) at 254 nm.

bThis level is overestimated, since Gm was trailing into the region where m1G migrated.

cThe growth of the various mutants at the indicated temperatures was determined by single-cell outstreak on TYS plates. The relative colony size was determined as the average size of ∼5 colonies in relation to the size of the wild type. Thus, <0.1 indicates that the growth of the mutant was <10% of that of the wild type.

dAt 22 and 30°C, the diameters of the colonies were scored after 48 h and the sizes of the wild-type colonies were 1.4 and 3 mm, respectively. At 37, 42.5 and 44°C, the colony sizes were scored after 24 h and the sizes of wild-type colonies were 1.8, 2.2 and 2.5 mm, respectively.

eNo col. denotes that only weak growth at the primary streak was observed and no individual colonies were visible. – denotes no growth. Bold denotes severe impairment of growth compared with the wild type.