Table 1.
Ratios from direct and indirect hybridizations.
Total number of gene expression ratios calculated from all spots (All) or spots 2 standard deviations (2 SD) above the average slide background are shown. Percentages of ratios above 2 SD are shown in parenthesis.
| Kidney vs. Breast | Prostate vs. Breast | Prostate vs. Kidney | ||||
|---|---|---|---|---|---|---|
| All | 2 SD | All | 2 SD | All | 2 SD | |
| RefOligo | 3,541 | 1,044 (29%) | 3,384 | 1,158 (34%) | 3,406 | 1,012 (30%) |
| RefPool | 3,447 | 891 (26%) | 2,673 | 906 (34%) | 2,678 | 820 (31%) |
| One-Color | 3,542 | 1,035 (29%) | 3,386 | 1,159 (34%) | 3,407 | 1,010 (30%) |
| Direct | 3,206 | 716 (22%) | 3,124 | 706 (23%) | 3,079 | 483 (16%) |