Table 3.
The power of the proposed test for 500 sibpairs when linkage signal is weak. A diallelic marker is completely linked to the QTL in perfect disequilibrium. The trait value is generated by a QTL with variance of varying size, together with polygenic and common environmental effects (with variance 0.3) and a random individual effect (with variance 0.5).
QTL variance | Fully informative marker | Partially informative marker | ||
Linkage | Association-Linkage | Linkage | Association-Linkage | |
0.03 | 0.102 | 0.307 | 0.083 | 0.285 |
0.05 | 0.148 | 0.402 | 0.145 | 0.475 |
0.10 | 0.284 | 0.666 | 0.260 | 0.575 |
0.20 | 0.563 | 0.874 | 0.520 | 0.838 |