Table 4.
ORF | |||||
Designation | Subgroupa | Size (bp) | Locationb | Conserved motifc | Size (codons) |
Ov.petB.1 | IB | 1322 | L8 | LAGLIDADG (2) | 264 |
Ov.psbA.1 | IA2 | 1127 | L6 | GIY-YIG | 240 |
Ov.rrl.1 | IB4 | 830 | L8 | LAGLIDADG (1) | 167 |
Ov.rrl.2 | IB4 | 1129 | L9.1 | LAGLIDADG (2) | 250 |
Ov.rrl.3 | IA3 | 767 | L6 | LAGLIDADG (1) | 165 |
a Introns were classified according to Michel and Westhof [44]. The subcategory of the Ov.petB.1 intron could not be identified unambiguously.
b L followed by a number refers to the loop extending the base-paired region identified by the number.
c The conserved motif in the predicted homing endonuclease is given, with the number of copies of the LAGLIDADG motif indicated in parentheses.