Table 3. Examples of retrieved cDNAs encoding secreted or membrane-bound proteins.
Gene product | GenBank accession no. | Retrieved fragmenta | Typeb | Abundancec |
---|---|---|---|---|
Bone sialoprotein | NM008318 | –71/+495 | Sec | High |
Calumenin | NM007594 | –63/+189 | Sec | High |
Cathepsin K | AK003425 | –52/+122 | Sec | Medium |
CD45, Tyr phosphatase receptor | XM016748 | –81/+182 | I | Medium |
Collagen type Iα2 | NM007743 | –80/+535 | Sec | High |
Dickkopf-1 | AF030433 | –22/+442 | Sec | Medium |
Endothelin receptor type B | NM007904 | –203/+166 | Mp | Low |
GPCR5C orphan receptor | AK014308 | –33/+106 | Mp | Low* |
Hedgehog interacting protein | NM020259 | –182/+130 | I | Low |
Hypoxia-induced gene 2 | AK009377 | –191/+185 | II | Medium* |
Leptin receptor | NM010704 | –131/+69 | I | Low |
Lysosomal proton pump Atp6s | NM031785 | –2/+241 | I | High |
Nicastrin | AF240469 | –18/+201 | I | Medium |
Osteocalcin | X04142 | –47/+269 | Sec | High* |
Osteopontin | J04806 | –69/+303 | Sec | High |
Resistin-like α | AF323082 | –76/+123 | Sec | Medium |
Sclerostin | AK017295 | –39/+158 | Sec | Low* |
Signal peptidase SPC22 | AK007432 | –58/+191 | II | High |
TMS-1 | AF181684 | –34/+180 | Mp | Medium |
a+1 corresponds to initiator ATG.
bSec, secreted; I, type I integral membrane protein; II, type II integral membrane protein; Mp, multipass membrane protein.
cRelative abundance of corresponding mRNA in starting material, approximated from published data or according to actual northern analysis (*).