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. 2003 Jan;77(1):97–104. doi: 10.1128/JVI.77.1.97-104.2003

TABLE 1.

Primers used in this study for RT-PCR and site-directed mutagenesis

Primer Sequence (5′ → 3′)a Location in the genomeb Polarity Purpose
E272 ATGAAGATCTACGGCTGC 10701-10718 + ORF5 PCR primer
E280 GCGTAGCATAGGGTAGTACTG 11525-11545 ORF5 PCR primer
E301 CCGTCAGCATGCTCAAGGTGAAG 11234-11257 Cys-34 → Ser mutation in GP5
E302 CAACAGGTTTTGCTAGCGGAAGAATTGTACAAAG 11303-11336 Cys-57 → Ser mutation in GP5
E303 CAATACCAACTAGTTTTACTGG 11321-11342 Cys-63 → Ser mutation in GP5
E304 CGTCCAGGAAAGTACTATACCAACAG 11331-11356 Cys-66 → Ser mutation in GP5
E305 CACGTTTGGTACCGATTCTGATGACACC 11367-11394 + Cys-80 → Ser mutation in GP5
E263 CATGCCCCCTTTTATTTACT 11460-11479 + ORF6 PCR primer
E163 CCACCAGTTGGCGATGGTTG 12185-12204 ORF6 PCR primer
E306 GATTCATTTTCCGGAGACGGGATTTTAG 11913-11940 + Cys-8 → Ser mutation in M
E336 GGCGGAACACTGGTACAAAGC 11302-11322 Asn-56 → Gln mutation in GP5
E363a GGTTTTACTGGCGCTGCAGCCGTACAAAGCAGT 11299-11332 Asn-56 → Gly mutation in GP5
E363a GGTTTTACTGGCGCTGCAGCTGTACAAAGCAGT 11299-11332 Asn-56 → Ser mutation in GP5
E364 GGTTTTACTGGCGCCGCAATTGTACAAAGC 11302-11332 Ser-58 → Gly mutation in GP5
E123 GCCCATGGCCAAGTAGGCCCCG 11625-11646 RT primer
a

Mutated nucleotides are depicted in bold, and (translationally silent) restriction sites engineered to select and identify mutants are underlined.

b

Genome positions are based on the sequence of EAV full-length cDNA clone pEAV030 (EMBL database accession number Y07862).