TABLE 2.
Identification of Za virus among Siberian TBEV, on the basis of 3′ UTR sequence
| Virus | Accession no. | Nucluotidea
|
|||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A2 | C5 | C8 | C37 | A75 | G377 | G404 | T421 | T423 | T484 | A537 | A556 | T594 | C620 | T635 | C695 | ||
| IR99-2m7 | AB049399 | G | |||||||||||||||
| Za | AF527415 | G | T | T | |||||||||||||
| IR99-1m4 | AB049398 | T | G | ||||||||||||||
| IR99-1m1 | AB049397 | G | T | T | T | T | A | A | C | C | C | G | T | C | T | G | |
| IR99-2f13 | AB049400 | G | T | T | T | A | A | C | C | C | G | T | C | T | C | ||
| Vs | L40361 | G | T | T | T | A | A | C | C | G | T | C | T | C | |||
| Aina | TEU27492 | G | T | T | T | A | A | C | C | G | T | C | T | ||||
a
The column headers represent nucleotides within the 3′ UTR, and the letters in the columns represent substitutions. The numeration corresponds to the sequence of strain IR99-1m4 of TBEV (Hayasaka, et al. no. 2930 [30]) starting from the first nucleotide after the stop codon.