Table 3.

Added UPR Upregulated Genes Meeting the 1000-3P-2 Restriction Criteria

				Tunicamycin										DTT
				0		2+		2		5+		5		0		2+		2		5+		5
AGI Gene	BAC	Affymetrix Code	Description	FV	F	FV	F	FV	F	FV	F	FV	F	FV	F	FV	F	FV	F	FV	F	FV	F
At1g09080	F7G19.5	16364_at	BiP-like	1.0	A	83.7	P	0.3	A	339.5	P	0.0	A	0.0	A	8.3 × 105	P	0.0	A	1.8 × 106	P	0.0	A
At1g09180	T12M4.12	17417_at	Putative GTP-binding   protein SAR1B	0.8	A	13.9	P	1.0	A	29.2	P	0.5	A	1.0	A	32.6	P	0.4	A	48.9	P	0.4	A
At4g16660	FCAALL.64	18140_at	HSP-like (D2T2)a	1.0	P	3.8	P	0.8	A	10.9	P	0.5	A	1.0	P	3.5	P	0.7	P	5.1	P	0.4	A
At2g46500	F13A10.3	18268_s_at	Putative ubiquitin	1.0	A	3.6	P	0.9	A	5.4	P	0.7	A	1.0	P	5.8	P	0.7	P	11.5	P	0.7	M
At5g35080	F7N22.4	14471_at	Contains similarity to   human OS-9	0.9	A	3.6	P	1.0	A	7.0	P	0.7	A	1.0	P	4.9	P	0.9	A	6.0	P	0.8	A
At4g19880	T16H5.240	16299_at	Putative GST	0.9	M	3.2	P	1.0	P	1.9	P	0.6	P	0.0	P	2.9 × 105	P	0.0	P	1.6 × 106	P	0.0	A
At4g01810	T7B11.7	13600_at	Putative protein   transport factor	1.0	A	2.3	P	0.8	A	3.7	P	0.0	A	0.7	P	2.1	P	0.8	P	2.5	P	1.0	P
At4g11800	T26M18.10	15774_at	Unknown protein	0.9	P	2.2	P	0.8	M	2.1	P	1.0	M	0.8	P	1.3	P	0.6	P	3.0	P	1.0	P
At2g16060	F7H1.8	17832_at	Class 1 nonsymbiotic   hemoglobin AHB1	0.5	M	2.2	P	1.0	P	1.2	P	1.0	A	1.0	P	2.0	P	0.6	P	6.1	P	0.7	P
At3g24050	F14O13.7	18246_at	GATA transcription   factor AtGATA-1	1.0	P	2.2	P	1.0	P	1.6	P	0.8	P	0.9	P	1.8	P	1.0	P	2.3	P	0.9	P
At1g56170	F14G9.21	19860_at	Transcription factor   hap5b	0.9	P	2.1	P	0.8	P	3.1	P	1.0	A	0.3	A	1.7	P	0.6	P	2.8	P	1.0	P
At4g15550	FCAALL.103	16603_s_at	UDP-Glucose:indole-3-   acetate β-d-gluco-   syltransferase	1.0	P	1.6	P	0.9	P	2.3	P	0.9	P	1.0	P	4.8	P	0.9	P	4.3	P	0.9	P
At1g67360	F1N21.36	19944_at	Stress-related protein,   putative	1.0	P	1.4	P	0.7	P	2.0	P	0.6	M	1.0	A	1.6	P	0.8	P	2.4	P	0.7	P
At4g26400	M3E9.170	19176_at	Putative ring zinc finger   protein	1.0	P	1.4	P	0.8	P	2.2	P	1.0	P	1.0	P	3.1	P	0.9	P	3.3	P	0.9	P
At4g14430	FCAALL.43	19366_at	Carnitine racemase-like   protein	1.0	P	1.4	P	1.0	P	2.2	P	1.0	P	0.9	P	1.8	P	1.0	P	2.6	P	1.0	P
At2g38470	T19C21.4	17303_s_at	AtWRKY-33	0.5	P	1.4	P	0.5	P	2.1	P	1.0	P	1.0	P	21.2	P	0.1	A	31.8	P	0.2	P
At1g07670	F24B9.24	20215_s_at	ER-type calcium-   transp. ATPase4	1.0	P	1.2	P	1.0	P	2.3	P	1.0	P	1.0	P	1.8	P	1.0	P	2.1	P	1.0	P
At5g59820	MMN10.11	13015_s_at	Zinc finger protein   Zat12	0.8	P	1.0	P	1.2	P	4.7	P	0.1	A	1.0	P	24.1	P	0.3	A	45.7	P	0.5	P
At2g18690	MSF3.7	17894_at	Unknown protein	0.7	P	1.0	P	0.8	P	2.2	P	1.1	P	1.0	P	4.0	P	0.3	P	16.6	P	0.4	A
At4g02880	T5J8.20	18623_at	Unknown protein	0.7	M	1.0	A	1.0	M	3.0	P	1.6	P	0.8	P	1.8	P	0.7	P	5.5	P	1.0	P
At2g44080	F6E13.24	12150_at	Unknown protein	1.0	P	1.0	P	1.3	P	2.4	P	1.0	P	1.0	P	2.2	P	0.5	P	2.3	P	0.5	P
At1g31130	F28K20.6	12092_at	Unknown protein	1.0	P	0.9	P	1.2	P	2.4	P	0.5	A	0.9	P	1.6	P	0.9	P	3.0	P	1.0	P
At5g39580	MIJ24.50	18946_at	Peroxidase ATP24a	1.0	P	0.7	A	1.0	P	2.3	P	0.9	P	1.0	P	4.5	P	0.2	M	3.3	P	0.3	P
At5g08790	T2K12.21	18591_at	ATAF2	0.7	P	0.6	P	1.5	P	2.3	P	1.0	P	1.0	P	12.9	P	0.4	P	19.4	P	0.4	A
At4g10040	T5L19.170	19624_at	Cytochrome c	1.0	P	0.6	P	1.0	P	2.0	P	0.5	M	0.5	P	1.6	P	0.6	P	3.6	P	1.0	P

Genes meeting the fold variation criterion of >2.5 are boldface and those between 2.5 and 2 are italicized boldface. FV, fold variation; F, absolute call flag; P, present; M, marginal; and A, absent.

^aNumbers of replicas on the Affymetrix GeneChip for this gene meeting the restrictions in tunicamycin (T) and DTT (D) are shown in parentheses.