Table 3.
Takifugu rubripes protein genes under positive Darwinian selection with significantly lower (a) or higher (b) distance to the human ortholog than other fish species. Duplicated genes are given with rate differences between the two copies according to the relative rate test of Tajima (1993) at the 5% level with one asterisk and at the 1% level with two asterisks.
| JGI Acc# | annotation according to human (UniGene) | duplicate rate difference |
| FRUP00000147506 | syntaxin 3A a | 0.178** |
| FRUP00000132184 | lysyl oxidase-like 1 a | 0.207** |
| FRUP00000139282 | chloride intracellular channel 5 a | 0.074 |
| FRUP00000156028 | twisted gastrulation a | - |
| FRUP00000136434 | mitochondrial elongation factor G1 a | 0.170* |
| FRUP00000139600 | TAFA2 a | - |
| FRUP00000129212 | serine/threonine protein kinase 6 a | - |
| FRUP00000153498 | exostosin 1 a | 0.086 |
| FRUP00000133663 | zinc finger protein 106 homolog b | 0.201** |
| FRUP00000162759 | hydroxysteroid (17-beta) dehydrogenase 4 a | - |
| FRUP00000133083 | dUTP pyrophosphatase a | - |
| FRUP00000133686 | excision repair cross-complementing 1 isoform 2 a | - |
| FRUP00000132409 | cytochrome c oxidase subunit Va a | - |
| FRUP00000129950 | glycine cleavage system protein H a | - |
| FRUP00000140923 | mitogen-activated protein kinase kinase kinase kinase 2 a | - |
| FRUP00000157532 | tryptophan rich basic protein a | - |
| FRUP00000133839 | stress-induced-phosphoprotein 1 a | - |
| FRUP00000136741 | dual specificity phosphatase 14 a | - |
| FRUP00000148346 | transitional epithelia response protein a | - |
| FRUP00000149078 | drebrin-like a | - |
| FRUP00000151439 | jumonji domain containing 2C a | 0.319** |
| FRUP00000134740 | tumor necrosis factor type 1 receptor associated protein a | 0.099** |
| FRUP00000133087 | leprecan-like 1 a | 0.317** |
| FRUP00000144902 | calcium binding protein 5 a | 0.012 |
| FRUP00000162608 | neurogenic differentiation 4 a | - |
| FRUP00000130779 | FLJ21963 protein a | - |
| FRUP00000143840 | thioredoxin domain containing a | - |
| FRUP00000154905 | terminal deoxynucleotidyltransferase interacting factor 1 a | - |
| FRUP00000128255 | SMILE protein a | - |