Table 1.
Polymorphisms and observed haplotypes in the canine CLCN3 gene
| Position1 | Boxer2 | Haplotype | Tibetan Terrier | PON | ||||||
| 1 | 2 | 3 | 4 | 5 | 6 | 1 | 2 | |||
| intron 1 | 16409 | T | T | T | T | T | T | T | T | C |
| exon 2 | 2 | A | A | A | A | A | A | G | A | A |
| intron 2 | 3 | G | A | G | G | A | G | A | G | G |
| intron 5 | 10 | G | A | A | A | A | A | A | A | A |
| intron 6 | 40 | A | A | A | A | A | A | A | del | del |
| intron 6 | 2861 | T | T | T | C | C | T | T | T | T |
| intron 6 | 3061 | C | G | G | G | G | G | C | G | G |
| intron 6 | 3266 | G | A | A | A | A | A | G | A | A |
| intron 6 | 3270 | G | A | G | G | A | A | A | G | G |
| intron 6 | 3291 | C | T | T | T | T | T | C | T | T |
| intron 7 | 38 | G | G | A | G | G | G | G | G | G |
| intron 7 | 144 | C | T | C | T | T | T | T | C | C |
| exon 9 | 6 | A | G | G | G | G | G | G | G | G |
1 Numbering refers to the position of the polymorphic nucleotide within the given exon or intron respectively.
2 Nucleotide refers to the publicly available dog genome sequence (AAEX01020012) from the boxer named Tasha.