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. 2006 Jan 20;90(8):2946–2957. doi: 10.1529/biophysj.105.072017

TABLE 2.

Standard errors of prediction for point-normalized spectra

RMS Cross-valid lin1 Cross-valid lin2 Cross-valid quad3 Direct valid Norm frequency Frequencies in model Model % of the secondary structure
α-Helix 21.8 6.9 6.6 7.2 6.2 1641 1545–1565–1530 −37.082 + 223.655 × A1545 − 86.095 × A1565 − 82.481 × A1530
β-Sheet 17.6 6.6 6.6 6.6 6.1 1653 1638–1530–1656 −68.570 + 70.386 × A1638 − 21.433 × A1530 + 32.581 × A1656
β-Turns 4.2 3.4 3.7 3.6 3.1 1565 1685–1563–1687 102.655 + 31.310 × A1685 − 94.161 × A1563 − 23.584 × A1687
Random 11.4 8.6 10.4 10.4 8.4 1552 1679–1553–1687 −569.019 + 87.979 × A1679 + 593.514 × A1553 − 89.106 × A1687
310-Helix 3.2 2.8 3.0 2.8 2.6 1545 1546–1547– 1512 1147.907 − 2192.463 × A1546 + 1058.537 × A1547 − 15.803 × A1512
Random + turns + 310-helices 12.8 8.0 9.1 10.3 7.2 1543 1671–1587–1541 −252.957 + 47.236 × A1671 + 47.690 × A1587 + 242.377 × A1541

For legend, see Table 1. The spectra were normalized here so that the absorbance at the wavenumber indicated in the column Norm frequency is 1. The normalization frequencies were optimized for the linear model (Cross-valid lin1) but not for the quadratic model (Cross-valid quad3). Note that the best values for the linear models for each structure between Tables 1 and 2 are in boldface type.

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