Skip to main content
. 2006 Mar;16(3):383–393. doi: 10.1101/gr.4410706

Table 1.

Methylation-specific PCR primer sequence and amplicon size

Primer set Forward primer, 5′ → 3′ Reverse primer, 5′ → 3′ Size (bp)
ACTB TGGTGATGGAGGAGGTTTAGTAAGT AACCAATAAAACCTACTCCTCCCTTAA 130
CFTR-M GTTTTGGGTTTGGCGGATTTTGACGC CCCGCAAATAAACGACAATCGCGAC 142
CFTR-U GGTTTTGGGTTTGGTGGATTTTGATGT CATCCCACAAATAAACAACAATCACAAC 146
DBC1-M ACGCGATCCCTTTAAATACTCGTACG GAGGAGAGACGGGAGGTCGTTTCG 131
DBC1-U ATATACACAATCCCTTTAAATACTCATACA GGAGGAGAGATGGGAGGTTGTTTTG 136
DLK1-M TCCGAAAAAATCTACGACCCAAATTCG AGACGGGTATAGGTATTTCGCGAGC 132
DLK1-U TCTCCAAAAAAATCTACAACCCAAATTCA GTTAGATGGGTATAGGTATTTTGTGAGT 137
EYA4-M TACGGAGATTACGGCGGCGTTATTC AACGCGAAAAACGACGACGCGCGA 150
EYA4-U GGGTATGGAGATTATGGTGGTGTTATTT CCAAAAACACAAAAAACAACAACACACAA 158
NPY-M TTAAAACCCTCTAACCGAAAACTTCCG ACGATTAGCGCGGTATTTTCGTCGG 131
NPY-U CTTTAAAACCCTCTAACCAAAAACTTCCA TTTTTATGATTAGTGTGGTATTTTTGTTGG 138