TABLE 3.
Percent identities of related NMB1966 to NMB1958 ORFs in gram-negative bacteriaa
| Organism | ORF (% identity)
|
||||||||
|---|---|---|---|---|---|---|---|---|---|
| ATP-binding protein | Inner membrane permease | Outer membrane substrate binding protein | Periplasm transport protein | NTP-binding protein (STAS) | Lipoprot. VacJ-like | Hypothet. protein | Thioesterase | Peroxiredoxine | |
| β-Proteobacteria | |||||||||
| N. meningitidis | NMB1966 | NMB1965 | NMB1964 | NMB1963 | NMB1962 | NMB1961 | NMB1960 | NMB1959 | NMB1958 |
| N. gonorrhoeae | NGO2116 (99) | NGO2117 (98) | NGO2118 (100) | NGO2119 (97) | NGO2120 (91) | NG2121 (97) | NG2122 (98) | NG2123 (99) | NG2124 (99) |
| N. lactamica | (99) | (100) | (97) | (96) | (89) | (96) | (98) | (100) | (99) |
| C. violaceum | CV0449 (84) | CV0448 (76) | CV0447 (81) | CV0446 (65) | CV0445 (55) | CV0444 (60) | // CV4255 (67) | // CV4256 (56) | // CV4257 (58) |
| Bordetella pertussis | BP3757 (69) | BP3758 (68) | BP3759 (67) | BP3761 (56) | BP3760 (49) | ||||
| γ-Proteobacteria | |||||||||
| E. coli | yrbF (71) | yrbE (64) | yrbD (63) | yrbC (54) | yrbB (56) | // vacJ (42) | |||
| S. flexneri | ypsA (71) | vpsB (64) | ypsC (63) | yrbC (54) | yrbB (56) | // vacJ (43) | |||
| Yersinia pestis | YP03575 (72) | YP03574 (64) | YP03573 (65) | YP03572 (52) | YP03571 (57) | // YP02743 (44) | |||
| P. putida | ttg2A (71) | ttg2B (64) | ttg2C (63) | ttg2D (46) | ttg2E (61) | // PP2163 (46) | |||
| Haemophilus influenzae | HI1087 (78) | HI1086 (70) | HI1085 (63) | HI1084 (44) | HI1083 (57) | // HI0718 (45) | |||
| X. fastidiosa | XF0421 (61) | XF0420 (56) | XF0419 (59) | XF0418 (43) | XF0417 (50) | XF0416 (46) | |||
| α-Proteobacteria | |||||||||
| B. melitensis | BME10964 (60) | BME10965 (49) | BME10965 (49) | ||||||
| ɛ-Proteobacteria | |||||||||
| Helicobacter pylori | HP1465 (60) | HP1466 (46) | HP1464 (49) | ||||||
| Campylobacter jejunii | CJ1647 (59) | CJ1646 (47) | CJ1648 (45) | // CJ1372 (48) | // CJ1371 (43%) | ||||
a
The symbol // marks ORFs that are split with respect to the ABC transporter-encoding cluster. Lipoprot., lipoprotein; Hypothet., hypothetical.