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. 2006 Apr;12(4):631–643. doi: 10.1261/rna.2226106

TABLE 1.

Comparison of AtCyp59 with homologous proteins from different organisms

Organism Protein size (aa) RS/RD or RE dipeptides % S/Ia
Arabidopsis thaliana 506 6/21
Oryza sativa 564 7/18 86/94
Homo sapiens 492 6/7 80/89
Mus musculus 460 3/4 80/89
Rattus norvegicus 510 7/7 80/89
Gallus gallus 452 3/7 80/88
Danio rerio 454 9/15 79/88
Tetraodon nigrovirides 409 9/6 80/91
Cionia intestinalis 522 5/7 77/87
Drosophila melanogaster 653 17/16 75/85
Aenopheles gambiae 652 38/17 79/86
Caenorhabditis elegans 427 6/12 74/87
Cryptosporidium hominis 342 3/0 79/83
Cryptosporidium parvum 342 3/0 79/83
Plasmodium falciparum 958 70/80
Plasmodiem yoelii yoelii 899 67/83
Dictiostelium discoideum 489 2/29 64/81
Paramecium tetraurelia 695 1/25 64/83
Entamoeba histolytica 330 0/0 62/79
Aspergilus nidulans 461 8/12 76/87
Coccidoides immitis 443 10/2 74/82
Coccidoides posadasii 443 9/3 74/82
Giberella zeae 605 4/15 77/85
Magnaporthe grisea 505 6/19 77/86
Neurospora crassa 803 9/25 80/89
Yarrowia lipolytica 469 24/34 63/74
Debaryomyces hansenii 331 0/0 53/71
Eremothecium gosypii 310 0/0 62/76
Kluyveromyces waltii 330 0/0 63/75
Pichia angusta 301 0/0 60/77
SchizoSaccharomyces pombe 432 6/9 77/86
Coprinopsis cinerea okayama 438 10/11 74/82
Cryptococcus neoformans 501 7/33 71/87
Phanerochaete chrysosporium 446 5/17 74/83
Ustilago maydis 551 10/22 69/83

aPercentage identity/similarity of AtCyp59 RRM with corresponding sequences from other organisms as depicted in Figure 2.