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. 2006 Apr;18(4):907–920. doi: 10.1105/tpc.105.038018

Table 2.

Effects of Group-Selective Reagents on STR1 Activity

[Reagent] (mM)
[Reagent]/[STR1] (mol/mol)
Group Selectivitya
Inactivation (%)
Reagent 30 min 2 h Buffer
DCC 0.05 50 Asp/Glu 100 A
WK 1.00 1,000 Asp/Glu 48 53 A
5.00 5,000 80 100
DEPC 1.00 1,000 His 49 63 B
PCMB 0.20 200 Cys 34 35 B
PMSF 1.00 1,000 Ser/Cys 0 0 C
TPCK 0.12 120 Ser/Cys 0 0 C
TLCK 0.25 250 Ser/Cys 0 0 C
AEBSF 4.00 4,000 Ser/Cys 4 12 C
NAI 10.00 10,000 Tyr 5 12 D
DNFB 5.00 5,000 Lys/Arg 0 15 D

Selective modification of reactive residues of STR1 was performed by adding various amounts (0.05 to 10 mM) of reagents to 1 μM enzyme solution in appropriate buffers. Aliquots of incubation mixture were taken at time intervals, and STR1 activity was measured. The pH of the reaction as well as the molar excess of reagent over the enzyme was designed to optimize the group selectivity of each reagent. DCC, N,N′-dicyclohexylcarbodiimide; WK, N-ethyl-5-phenylisoxazolium-3′-sulfonate (Woodward's reagent K); DEPC, diethylpyrocarbonate; PCMB, p-chloromercuribenzoate; PMSF, phenylmethanesulfonyl fluoride; TPCK, l-chloro-3-(4-tosyl-amido)-4-phenyl-2-butanone; TLCK, l-chloro-3-(4-tosyl-amido)-7-amino-2-heptanone; AEBSF, 4-(2-aminoethyl)-benzenesulfonyl-fluoride; NAI, N-acetylimidazole; DNFB, dinitrofluorobenzene. Buffer A, 50 mM MES, pH 6.0; buffer B, 100 mM potassium phosphate buffer, pH 6.0; buffer C, 100 mM potassium phosphate buffer, pH 7.0; buffer D, 10 mM Tris-HCl, pH 8.0.

a

The most likely side chains modified under the conditions of the experiment.