Table 2.
[Reagent] (mM)
|
[Reagent]/[STR1] (mol/mol)
|
Group Selectivitya
|
Inactivation (%)
|
|||
---|---|---|---|---|---|---|
Reagent | 30 min | 2 h | Buffer | |||
DCC | 0.05 | 50 | Asp/Glu | 100 | A | |
WK | 1.00 | 1,000 | Asp/Glu | 48 | 53 | A |
5.00 | 5,000 | 80 | 100 | |||
DEPC | 1.00 | 1,000 | His | 49 | 63 | B |
PCMB | 0.20 | 200 | Cys | 34 | 35 | B |
PMSF | 1.00 | 1,000 | Ser/Cys | 0 | 0 | C |
TPCK | 0.12 | 120 | Ser/Cys | 0 | 0 | C |
TLCK | 0.25 | 250 | Ser/Cys | 0 | 0 | C |
AEBSF | 4.00 | 4,000 | Ser/Cys | 4 | 12 | C |
NAI | 10.00 | 10,000 | Tyr | 5 | 12 | D |
DNFB | 5.00 | 5,000 | Lys/Arg | 0 | 15 | D |
Selective modification of reactive residues of STR1 was performed by adding various amounts (0.05 to 10 mM) of reagents to 1 μM enzyme solution in appropriate buffers. Aliquots of incubation mixture were taken at time intervals, and STR1 activity was measured. The pH of the reaction as well as the molar excess of reagent over the enzyme was designed to optimize the group selectivity of each reagent. DCC, N,N′-dicyclohexylcarbodiimide; WK, N-ethyl-5-phenylisoxazolium-3′-sulfonate (Woodward's reagent K); DEPC, diethylpyrocarbonate; PCMB, p-chloromercuribenzoate; PMSF, phenylmethanesulfonyl fluoride; TPCK, l-chloro-3-(4-tosyl-amido)-4-phenyl-2-butanone; TLCK, l-chloro-3-(4-tosyl-amido)-7-amino-2-heptanone; AEBSF, 4-(2-aminoethyl)-benzenesulfonyl-fluoride; NAI, N-acetylimidazole; DNFB, dinitrofluorobenzene. Buffer A, 50 mM MES, pH 6.0; buffer B, 100 mM potassium phosphate buffer, pH 6.0; buffer C, 100 mM potassium phosphate buffer, pH 7.0; buffer D, 10 mM Tris-HCl, pH 8.0.
The most likely side chains modified under the conditions of the experiment.