Skip to main content
. 2003 Feb;185(3):703–713. doi: 10.1128/JB.185.3.703-713.2003

TABLE 1.

Oligonucleotide primers used in this studya

Name Sequence Domain(s) amplifiedb
ScaAcoh1r2 ATGTAGGAACGAGCTTTGTGC ScaA dockerin (rev)
ScaAcoh5r ATCAGCATTTGATGTCTGGC ScaA cohesins (rev)
ScaAcoh7f CAGTCGGCACTGTAACACC ScaA X domain (fwd)
ScaAcoh7r GCGAGGTTGTACTTGGAC ScaA cohesins (rev)
ScaAcoh8f GCTCCTTCAACTGTAGGC ScaA X domain (fwd)
ScaAcoh8r GCTGAGAAGTAAGGCTGGTC ScaA X domain (rev)
ScaAcoh9f GTCCAAGTACAACCTCGC ScaA X domain (fwd)
AUnk-NcoI TATACCATGGCTCCTTCAACTGTAGGCGCT ScaA N terminal (fwd)
AUnk-XhoI AAATCTCGAGTGTACCGGGTGTTGAACCGT ScaA N terminal (rev)
Bcoh1-NcoI ATATCCATGGCTGCCGGTGGTTTA ScaB cohesin 1 (fwd)
Bcoh1-XhoI CGGTCTCGAGATCCTTCTTAACAAT ScaB cohesin 1 (rev)
Bcoh2-NcoI AAAACCATGGTCAACAACACAGGTAAG ScaB cohesin 2 (fwd)
Bcoh2-XhoI CTCACTCGAGATCATTCTTGACTGTGAT ScaB cohesin 2 (rev)
Bcoh3-NcoI CAATCCATGGTACAGACGGTAGGTAAA ScaB cohesin 3 (fwd)
Bcoh3-XhoI AAAACTCGAGTACAGGCTTGCCGAC ScaB cohesin 3 (rev)
Bcoh6-NcoI AAAACCATGGCTCCTCAGGGCGGTATC ScaB cohesin 6 (fwd)
Bcoh6-XhoI ATCACTCGAGAATAACGGGCTTCTTTAC ScaB cohesin 6 (rev)
Bcoh7-NcoI AATTCCATGGTAGTTCCCAAGGATTCT ScaB cohesin 7 (fwd)
Bcoh7-XhoI ATATCTCGAGAGGAGCGGGCTTTTCAAA ScaB cohesin 7 (rev)
EndB-NcoI AATTCCATGGCGCCCGTCAACGGTCTG EndB full length (fwd)
EndB-XhoI CACGCTCGAGTTCGGGAAGCTTGTCTAT EndB full length (rev)
XynE-NcoI CTGACCATGGTTACAAATCCTACTATCAAT XynE dockerin + family 1 carbohydrate esterase (fwd)
XynE-XhoI AGTGCTCGAGCTTGAAAGCATATCTGAAGA XynE dockerin + family 1 carbohydrate esterase (rev)
XynB-EcoRI AAGGAATTCACCACACAGCCTTCGAGC XynB family 3 carbohydrate esterase + dockerin (fwd)
XynB-XhoI AACCGCTCGAGCTTGCAACTTTACCGATGAGG XynB family 3 carbohydrate esterase + dockerin (rev)
CesA-EcoRI AAGGAATTCAAGCACTTTGTTGTCGG CesA family 3 carbohydrate esterase + dockerin (fwd)
CesA-XhoI AACCGCTCGAGCAGGGAAGTTGTAGC CesA family 3 carbohydrate esterase + dockerin (rev)
a

Residues shown in italics were added to the 5′ ends to generate restriction enzyme cleavage sites (underlined).

b

Abreviations: fwd, forward; rev, reverse.