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. 2006 Apr;188(7):2593–2603. doi: 10.1128/JB.188.7.2593-2603.2006

TABLE 2.

Sequences of oligonucleotides used in PCR, Lightcycler, or Northern blotting reactions in this study

Primer or probe Oligonucleotide sequence (5′→3′)
Lightcycler
    spa-F CAGATAACAAATTAGCTGATAAAAACAT
    spa-R CTAAGGCTAATGATAATCCACCAAATAC
    cna-F AACGAACAAGTATACACCAGGAGAG
    cna-R TTTGCTTTTTCATCTAATCCTGTC
    16SrRNA-F ACACAGTCTGAGATGATTGTAGTGTTC
    16SrRNA-R GCTTTCACATCAGACTTAAAAA
    SA1278-F ACACAGTCTGAGATGATTGTAGTGTTC
    SA1278-R ATCGAAAGACTTAGGATATTTCATTGC
    gyrA-F CTGAGCGTAATGGTAATGTTGTATG
    gyrA-R TGCATCTTCTTTTACTTTAGCAACC
    dnaA-F CCAAAAGAAACAACAAAACCTTCTA
    dnaA-R AAACCAACCCCTCCATAGATAAATA
    hup-F CTGGTTCAGCAGTAGATGCTGTATT
    hup-R ATCTTTTAATGCTTTACCAGCTTTG
    purH-F ATCAAGAAGTATTGACGCGATTAAG
    purH-R GATTGTTGTGGATTTTCTCCATATC
PCR
    spa-F CATACAGGGGGTATTAATTTGAAAA
    spa-R AGTAGAAAGTGTTGAGGCGTTTCAG
    16SrRNA-F TTTTATGGAGAGTTTGATCCTGGCTC
    16SrRNA-R ATATCCTTAGAAAGGAGGTGATCCAG
Northern blotting
    WAN014GIY CCTGATACACATCTTTCTACGTGTG
    cna-F AACGAACAAGTATACACCAGGAGAG