Table 2.
The 20 transcripts displaying the strongest increase in expression in the cell line L1236 compared with GC B cells
|
n |
||||
|---|---|---|---|---|
| Fold difference | Tag sequence | CB | L1236 | Unigene cluster: gene name |
| 74 | GTCCCTGCCT | 1 | 74 | Hs.301961: glutathione S-transferase |
| 46 | AAATGTTTGG | 1 | 46 | Hs.9754: ATF-5 |
| 38 | CCCTGGGTTC | 7 | 266 | Hs.111334: ferritin, light polypeptide |
| 36 | TACAGCACGG | 0 | 36 | Hs.111811: microsomal glutathione S-transferase 3 |
| 35 | TCACTCCTGG | 1 | 35 | Hs.75859: mitochondrial ribosomal protein L49
Hs.9754: ATF-5 |
| 30 | TGGGGTTCTT | 0 | 30 | Hs.272499: alcohol dehydrogenase family member
Hs.62954: ferritin, heavy polypeptide 1 |
| 26 | GAGGCCACCC | 0 | 26 | Hs.62919: p21SNFT |
| 20 | ACTGCAGCCA | 0 | 20 | Hs.22404: protease, serine, 12
Hs.67726: MARCO |
| 18 | GTGCCATATT | 1 | 18 | Hs.254709: EST
Hs.5337: isocitrate dehydrogenase 2 |
| 18 | TTCTGCTTTC | 0 | 18 | Hs.1652: CCR7 |
| 18 | GATACAGCCA | 1 | 18 | Hs.1416: CD23A |
| 18 | GCAAACGTTG | 0 | 18 | Hs.49768: ESTs |
| 18 | TGCAGGCCTG | 1 | 18 | Hs.82030: tryptophanyl-tRNA synthetase |
| 17 | GCCCCCAATA | 1 | 17 | Hs.227751: galectin 1 |
| 17 | ATAGTAGCTT | 0 | 17 | Hs.118400: Fascin |
| 17 | GTGACCACGG | 1 | 17 | Hs.299882: ESTs, Highly similar to N-methyl-D- aspartate receptor 2C subunit precursor |
| 16 | CTCAACCCCC | 0 | 16 | Hs.89137: low density lipoprotein related protein 1
Hs.234249: MAPK 8 interacting protein 1 |
| 16 | CCCCCGTGAA | 0 | 16 | Hs.182018: IRAK-1 |
| 16 | CCTGGAAGAG | 1 | 16 | Hs.75655: thyroid hormone binding protein p55 |
| 15 | TTTTCTGAAA | 0 | 15 | Hs.76136: thioredoxin |
n indicates the number of times the tag was identified per 30000 tags. The fold difference was calculated as described in Material and Methods. CB, centroblasts.