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. 2006 Feb 21;7(2):R14. doi: 10.1186/gb-2006-7-2-r14

Table 4.

Observed and expected densities of SSRs in different genic regions

5'-UTR Exon Intron 3'-UTR
Arabidopsis
Mononucleotide 434.6 (12.3) 3.3 (4.8) 321.6 (65.7) 33.9 (3.2)
Dinucleotide 664.2 (20.4) 7.3 (12.9) 122.7 (33.9) 12.3 (3.1)
Trinucleotide 702.7 (7.7) 218.7 (4.5) 90.9 (17.6) 17.1 (1.4)
Tetranucleotide 105.8 (27.7) 3.3 (17.9) 58.7 (58.9) 8.7 (4.5)
Rice
Mononucleotide 248.1 (6.1) 4.2 (3.7) 132.9 (4.9) 222.8 (11.5)
Dinucleotide 500.6 (13.2) 16.1 (11.5) 70.9 (12.8) 88.5 (16.9)
Trinucleotide 1670.6 (4.5) 421.4 (3.9) 182.3 (4.4) 153.2 (6.5)
Tetranucleotide 337.4 (18.7) 7.6 (16.1) 46.2 (17.7) 121.6 (24.3)

The unit is per mega-base pairs. The numbers listed in parentheses are the expected densities of various periods in different regions.