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. 2006 Feb 3;90(9):3052–3061. doi: 10.1529/biophysj.105.073171

TABLE 1.

Simulation parameters

MNEI MNEI G-16A
Energy (kJ/mol) E final(Ef) E final(Ef)
Protein-protein (total) −7630.0 −7773.0
Protein-protein (LJ) −3398.9 −3473.0
Protein-protein (El) −4231.1 −4361.9
Protein-solvent (total) −6728.1 −6337.8
MNEI MNEI G-16A
Cα-RMSD (nm)—L23 excl. 0.199 (0.0220) 0.233 (0.0282)
Starting box size (Å) 76.9 × 65.5 × 64.7 75.4 × 67.3 × 67.6
Water molecules 10,361 10,716

Standard deviation in parentheses.