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. 2006 Feb 10;90(9):3267–3279. doi: 10.1529/biophysj.105.079376

FIGURE 7.

FIGURE 7

Conformational changes of the MIDAS coordination sphere region upon the dissociation of PAII from CMG2. The equilibrated SN structure is shown in gray. The equilibrated SHE structure, where PAII becomes partially dissociated, is colored following the code defined in Fig. 1 b. Residues not belonging to the binding sites on CMG2 are dimmed. The SN and SHE structures were aligned using the coordinates of CMG2. The amino acids and water molecules W1 and W2 coordinating the MIDAS cation are shown in licorice representation. The coordination of water W1 by Asp-148CMG2 is disturbed due to the dissociation of PAII in the SHE structure. Shown in the inset are the profiles for the distance between MIDAS water W1 and two side-chain oxygens of Asp-148CMG2 over the course of the equilibration of SN and SHE structures.