TABLE 3.
mRNA levels of genes involved in regulation
| Open reading frame | Gene | Description | Mean mRNA levels (arbitrary units) ± SDa
|
||||
|---|---|---|---|---|---|---|---|
| Glucose
|
Glucose + xylose
|
Xylose (TMB 3400) | |||||
| TMB 3399 | TMB 3400 | TMB 3399 | TMB 3400 | ||||
| YBR083W | TEC1 | Transcription factor of the TEA/ATTS DNA-binding domain family, regulator of Ty1 expression | 140 ± 17 | 68 ± 15 | 175 ± 37 | 88 ± 31 | 107 ± 4 |
| YPR199C | ARR1 | Similar to transcriptional regulatory elements YAP1 and CAD1 | 160 ± 20 | 114 ± 12 | 166 ± 16 | 109 ± 2 | 120 ± 11 |
| YCR020C | PET18 | Transcription regulator | 37 ± 1 | 41 ± 11 | 77 ± 32 | 204 ± 118 | 23 ± 11 |
| YDR477W | SNF1 | Protein serine/threonine kinase | 94 ± 19 | 109 ± 1 | 64 ± 1 | 98 ± 1 | 116 ± 2 |
| YGL115W | SNF4 | Associates with Snf1p | 175 ± 25 | 206 ± 1 | 145 ± 3 | 179 ± 17 | 177 ± 1 |
| YGL035C | MIG1 | C2H2 zinc finger protein, which resembles the mammalian Egr and Wilms tumor proteins | 14 ± 7 | 14 ± 3 | 23 ± 0 | 10 ± 9 | 6 ± 2 |
| YGL209W | MIG2 | Protein containing zinc fingers very similar to the zinc fingers in Mig1p | 21 ± 1 | 16 ± 2 | 28 ± 1 | 22 ± 3 | 14 ± 6 |
| YMR280C | CAT8 | Zinc cluster protein involved in activating gluconeogenic genes; related to Gal4p | 62 ± 1 | 58 ± 12 | 66 ± 9 | 48 ± 15 | 129 ± 23 |
| YPL248C | GAL4 | Zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type | 66 ± 2 | 59 ± 0 | 66 ± 0 | 74 ± 0 | 57 ± 2 |
| YML051W | GAL80 | Regulatory protein | 188 ± 12 | 147 ± 3 | 190 ± 27 | 174 ± 6 | 182 ± 17 |
| YDR009W | GAL3 | Galactokinase | 51 ± 17 | 44 ± 5 | 56 ± 9 | 39 ± 4 | 80 ± 11 |
a
Expression levels where TMB 3400 differs greatly are indicated in boldface.