Table 2.
5′ Context | Stop Codon | 3′ Context | Abbreviation |
---|---|---|---|
Prokaryotic termination contexts | |||
CAG AAG | UAA | UCU | Aba UAA Ab |
CAG AAG | UAA | CUG | Ab UAA Rab |
GAA ACC | UAA | UCU | Ra UAA Ab |
GAA ACC | UAA | CUG | Ra UAA Ra |
GUC GCG | UAG | GGG | Ab UAG Ab |
GUC GCG | UAG | CAU | Ab UAG Ra |
GAU GGA | UAG | GGG | Ra UAG Ab |
GAU GGA | UAG | CAU | Ra UAG Ra |
AAU UUC | UGA | UUU | Ab UGA Ab |
AAU UUC | UGA | CUA | Ab UGA Ra |
GAA ACU | UGA | UUU | Ra UGA Ab |
GAA ACU | UGA | CUA | Ra UGA Ra |
Eukaryotic termination contexts | |||
AAG GUC | UAA | GCU | Ab UAA Ab |
AAG GUC | UAA | UGU | Ab UAA Ra |
UUC CCA | UAA | GCU | Ra UAA Ab |
UUC CCA | UAA | UGU | Ra UAA Ra |
AAG GUC | UAG | GCU | Ab UAG Ab |
AAG GUC | UAG | UGU | Ab UAG Ra |
UUC CCA | UAG | GCU | Ra UAG Ab |
UUC CCA | UAG | UGU | Ra UAG Ra |
AAG GUC | UGA | GCU | Ab UGA Ab |
AAG GUC | UGA | UGU | Ab UGA Ra |
UUC CCA | UGA | GCU | Ra UGA Ab |
UUC CCA | UGA | UGU | Ra UGA Ra |
aAb = abundant.
bRa = rare.